Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose isomerase | SAMEA3710568_03274 | Not Available | Negative | 3199332 - 3200009 | 25725.4 |
| xylose binding protein transport system | SAMEA3710568_03275 | Not Available | Positive | 3200375 - 3201367 | 35721.1 |
| xylose transporter atp-binding subunit | SAMEA3710568_03276 | Not Available | Positive | 3201445 - 3202986 | 56606.0 |
| d-xylose abc transporter permease | SAMEA3710568_03277 | Not Available | Positive | 3202964 - 3204145 | 41033.5 |
| xylose operon regulatory protein | SAMEA3710568_03278 | Not Available | Positive | 3204223 - 3204753 | 20292.7 |
| xylose operon regulatory protein | SAMEA3710568_03279 | Not Available | Positive | 3204865 - 3205401 | 20390.8 |
| putative atp-binding protein | SAMEA3710568_03280 | Not Available | Negative | 3205509 - 3206333 | 30853.3 |
| periplasmic alpha-amylase | SAMEA3710568_03281 | Not Available | Positive | 3206895 - 3208682 | 67193.1 |
| valine--pyruvate transaminase | SAMEA3710568_03282 | Not Available | Positive | 3208860 - 3210113 | 46700.9 |
| 4fe-4s binding protein | SAMEA3710568_03283 | Not Available | Negative | 3210264 - 3210737 | 17433.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





