Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative cp4-57-type integrase | SAMEA3710568_03264 | Not Available | Positive | 3188844 - 3190085 | 46672.2 |
| is1 orfb | SAMEA3710568_03265 | Not Available | Positive | 3190689 - 3190982 | 11467.1 |
| glycyl-trna synthetase subunit beta | SAMEA3710568_03266 | Not Available | Negative | 3191572 - 3193641 | 76801.2 |
| glycyl-trna synthetase subunit alpha | SAMEA3710568_03267 | Not Available | Negative | 3193651 - 3194562 | 34718.2 |
| lipoprotein | SAMEA3710568_03268 | Not Available | Negative | 3194657 - 3194956 | 11352.8 |
| inner membrane protein yiah | SAMEA3710568_03269 | Not Available | Positive | 3195131 - 3196126 | 37600.1 |
| inner membrane protein yiaa | SAMEA3710568_03270 | Not Available | Negative | 3196168 - 3196605 | 16123.6 |
| yiaa/b two helix domain family protein | SAMEA3710568_03271 | Not Available | Negative | 3196651 - 3196992 | 12553.0 |
| xylulokinase | SAMEA3710568_03272 | Not Available | Negative | 3197161 - 3198615 | 52653.3 |
| xylose isomerase | SAMEA3710568_03273 | Not Available | Negative | 3198687 - 3199325 | 23760.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





