Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative cytochrome c assembly protein | SAMEA3710568_03254 | Not Available | Positive | 3180571 - 3181437 | 32131.5 |
| putative cbs domain-containing protein | SAMEA3710568_03255 | Not Available | Positive | 3181503 - 3182744 | 46353.0 |
| heat shock protein grpe | SAMEA3710568_03256 | Not Available | Negative | 3182799 - 3183392 | 21813.1 |
| inorganic polyphosphate/atp-nad kinase | SAMEA3710568_03257 | Not Available | Positive | 3183515 - 3184393 | 32568.3 |
| recombination and repair protein | SAMEA3710568_03258 | Not Available | Positive | 3184479 - 3186140 | 61405.1 |
| small protein a | SAMEA3710568_03259 | Not Available | Positive | 3186289 - 3186630 | 12302.8 |
| uncharacterised protein family (upf0125) | SAMEA3710568_03260 | Not Available | Negative | 3186692 - 3186982 | 10806.0 |
| ribosome association toxin rata | SAMEA3710568_03261 | Not Available | Negative | 3186972 - 3187448 | 17727.7 |
| ssra-binding protein | SAMEA3710568_03262 | Not Available | Positive | 3187580 - 3188062 | 18270.1 |
| Tmrna,resume consensus sequence (at 83): aatagtcgcaaacgacga | Not Available | Not Available | Positive | 3188277 - 3188639 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





