Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative excinuclease atpase subunit | SAMEA3710568_03244 | Not Available | Positive | 3174159 - 3174521 | 13172.3 |
| uncharacterised protein | SAMEA3710568_03245 | Not Available | Positive | 3174671 - 3175189 | 18953.1 |
| putative inner membrane diguanylate cyclase | SAMEA3710568_03246 | Not Available | Positive | 3175179 - 3175538 | 13161.3 |
| inner membrane protein yfin | SAMEA3710568_03247 | Not Available | Positive | 3175733 - 3176404 | 25506.3 |
| outer membrane lipoprotein | SAMEA3710568_03248 | Not Available | Positive | 3176420 - 3176902 | 17211.5 |
| 50s ribosomal protein l19 | SAMEA3710568_03249 | Not Available | Negative | 3176979 - 3177326 | 13134.0 |
| trna (guanine-n(1)-)-methyltransferase | SAMEA3710568_03250 | Not Available | Negative | 3177368 - 3178135 | 28424.0 |
| 16s rrna-processing protein rimm | SAMEA3710568_03251 | Not Available | Negative | 3178166 - 3178714 | 20606.6 |
| 30s ribosomal protein s16 | SAMEA3710568_03252 | Not Available | Negative | 3178733 - 3178981 | 9191.08 |
| signal recognition particle protein | SAMEA3710568_03253 | Not Available | Negative | 3179118 - 3180479 | 49776.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





