Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrogen regulation protein nr(i) | SAMEA3710568_03211 | Not Available | Negative | 3138306 - 3139715 | 52332.9 |
| nitrogen regulation protein nr(ii) | SAMEA3710568_03212 | Not Available | Negative | 3139727 - 3140776 | 38558.5 |
| glutamine synthetase | SAMEA3710568_03213 | Not Available | Negative | 3140949 - 3142358 | 51906.6 |
| putative hth-type transcriptional regulator yihl | SAMEA3710568_03215 | Not Available | Positive | 3144771 - 3145481 | 26940.3 |
| xylose isomerase domain-containing protein | SAMEA3710568_03216 | Not Available | Positive | 3145489 - 3146469 | 36925.9 |
| transporter, major facilitator family | SAMEA3710568_03217 | Not Available | Positive | 3146571 - 3147629 | 38915.5 |
| fructose-1,6-bisphosphatase | SAMEA3710568_03218 | Not Available | Negative | 3147883 - 3148881 | 36836.0 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | SAMEA3710568_03219 | Not Available | Positive | 3149057 - 3150430 | 49896.1 |
| x96 protein | SAMEA3710568_03220 | Not Available | Negative | 3150513 - 3151064 | 21386.6 |
| peptidase pmba | SAMEA3710568_03221 | Not Available | Positive | 3151158 - 3152510 | 48371.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





