Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucarate dehydratase | SAMEA3710568_03166 | Not Available | Negative | 3093992 - 3095332 | 48869.4 |
| transporter | SAMEA3710568_03167 | Not Available | Negative | 3095334 - 3096686 | 49146.0 |
| flavodoxin | SAMEA3710568_03168 | Not Available | Negative | 3097120 - 3097569 | 16275.1 |
| trna pseudouridine synthase c | SAMEA3710568_03169 | Not Available | Negative | 3097587 - 3098369 | 29667.5 |
| domain of uncharacterised function, duf446 | SAMEA3710568_03170 | Not Available | Negative | 3098369 - 3098698 | 12730.1 |
| secy interacting protein syd | SAMEA3710568_03172 | Not Available | Negative | 3099320 - 3099865 | 20686.5 |
| 7-cyano-7-deazaguanine reductase | SAMEA3710568_03173 | Not Available | Positive | 3099933 - 3100781 | 32573.2 |
| log family protein ygdh | SAMEA3710568_03174 | Not Available | Positive | 3100893 - 3102257 | 50975.0 |
| tfox family protein | SAMEA3710568_03175 | Not Available | Negative | 3102587 - 3103012 | 16376.8 |
| sos cell division inhibitor | SAMEA3710568_03176 | Not Available | Positive | 3103231 - 3103740 | 18862.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





