Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-dicitrate transporter substrate-binding subunit | SAMEA3710568_03146 | Not Available | Negative | 3068499 - 3069401 | 33198.3 |
| citrate-dependent iron transport, outer membrane receptor | SAMEA3710568_03147 | Not Available | Negative | 3069446 - 3071770 | 85282.2 |
| fec operon regulator fecr | SAMEA3710568_03148 | Not Available | Negative | 3071857 - 3072810 | 35534.1 |
| rna polymerase sigma factor feci | SAMEA3710568_03149 | Not Available | Negative | 3072807 - 3073328 | 19481.5 |
| uncharacterised protein | SAMEA3710568_03150 | Not Available | Negative | 3074012 - 3074122 | 4160.26 |
| biofilm development protein ymgb/arir | SAMEA3710568_03151 | Not Available | Positive | 3074246 - 3074503 | 9908.9 |
| uncharacterized protein conserved in bacteria | SAMEA3710568_03152 | Not Available | Positive | 3075236 - 3076594 | 49070.4 |
| issfl4 orf3 | SAMEA3710568_03153 | Not Available | Negative | 3076833 - 3078218 | 51860.2 |
| is66 family element, orf2 | SAMEA3710568_03154 | Not Available | Negative | 3078268 - 3078615 | 12815.9 |
| 7-carboxy-7-deazaguanine synthase | SAMEA3710568_03155 | Not Available | Negative | 3079232 - 3079903 | 25031.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





