Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1 orfb | SAMEA3710568_03136 | Not Available | Negative | 3061299 - 3061592 | 11467.1 |
| is1 orf1 | SAMEA3710568_03137 | Not Available | Negative | 3061721 - 3061996 | 9902.97 |
| putative glycosyl transferase, group 1 family protein | SAMEA3710568_03138 | Not Available | Negative | 3062047 - 3062658 | 23095.2 |
| carbohydrate transport protein | SAMEA3710568_03139 | Not Available | Negative | 3062661 - 3063482 | 32296.7 |
| transposase orfa | SAMEA3710568_03140 | Not Available | Positive | 3063689 - 3063991 | 11739.1 |
| is911 orfa | SAMEA3710568_03141 | Not Available | Positive | 3064233 - 3064646 | 15463.8 |
| uncharacterised protein | SAMEA3710568_03142 | Not Available | Positive | 3064968 - 3065225 | 9465.12 |
| iron-dicitrate transporter atp-binding subunit | SAMEA3710568_03143 | Not Available | Negative | 3065783 - 3066550 | 28192.5 |
| iron-dicitrate transporter subunit fecd | SAMEA3710568_03144 | Not Available | Negative | 3066551 - 3067507 | 34152.7 |
| iron-dicitrate transporter permease subunit | SAMEA3710568_03145 | Not Available | Negative | 3067504 - 3068502 | 34927.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





