Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen synthesis protein glgs | SAMEA3710568_03126 | Not Available | Positive | 3054516 - 3054716 | 7906.34 |
| is4 orf | SAMEA3710568_03127 | Not Available | Negative | 3054759 - 3055301 | 19503.6 |
| uncharacterised protein | SAMEA3710568_03128 | Not Available | Positive | 3055767 - 3055940 | 6930.15 |
| act domain-containing protein | SAMEA3710568_03129 | Not Available | Positive | 3055933 - 3056319 | 13818.9 |
| uncharacterized protein conserved in archaea | SAMEA3710568_03130 | Not Available | Positive | 3056390 - 3057013 | 23123.0 |
| tetracycline repressor protein class b from transposon tn10 | SAMEA3710568_03131 | Not Available | Negative | 3056991 - 3057614 | 23356.0 |
| tetracycline resistance protein, class b (teta(b)) (metal- tetracycline/h(+) antiporter) | SAMEA3710568_03132 | Not Available | Positive | 3057696 - 3058901 | 43239.8 |
| transposon tn10 tetc protein | SAMEA3710568_03133 | Not Available | Negative | 3059014 - 3059607 | 22747.6 |
| putative transcriptional regulator tetd | SAMEA3710568_03134 | Not Available | Positive | 3059695 - 3060111 | 16775.3 |
| iso-is10r orf | SAMEA3710568_03135 | Not Available | Negative | 3060121 - 3061008 | 33475.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





