Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vtamin b12-transporter permease | SAMEA3710568_03049 | Not Available | Negative | 2973334 - 2974314 | 34969.6 |
| phenylalanyl-trna synthetase subunit beta | SAMEA3710568_03051 | Not Available | Negative | 2974719 - 2977106 | 87416.2 |
| phenylalanyl-trna synthetase subunit alpha | SAMEA3710568_03052 | Not Available | Negative | 2977121 - 2978104 | 36833.9 |
| 50s ribosomal protein l20 | SAMEA3710568_03054 | Not Available | Negative | 2978554 - 2978910 | 13527.8 |
| 50s ribosomal protein l35 | SAMEA3710568_03055 | Not Available | Negative | 2978963 - 2979160 | 7289.38 |
| translation initiation factor if-3 | SAMEA3710568_03056 | Not Available | Negative | 2979257 - 2979691 | 16668.4 |
| threonyl-trna synthetase | SAMEA3710568_03057 | Not Available | Negative | 2979803 - 2981731 | 74018.4 |
| glycoprotein/polysaccharide metabolism | SAMEA3710568_03058 | Not Available | Negative | 2982931 - 2983503 | 19442.3 |
| acyl-coa thioesterase ii | SAMEA3710568_03059 | Not Available | Positive | 2983721 - 2984581 | 32014.2 |
| ammonium transporter | SAMEA3710568_03060 | Not Available | Negative | 2984630 - 2985916 | 44545.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





