Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin e | SAMEA3710568_02979 | Not Available | Positive | 2901813 - 2902154 | 12880.2 |
| hemolysin e | SAMEA3710568_02980 | Not Available | Positive | 2902126 - 2902713 | 21523.9 |
| uncharacterized conserved protein | SAMEA3710568_02981 | Not Available | Negative | 2902920 - 2903366 | 17329.5 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | SAMEA3710568_02982 | Not Available | Negative | 2903458 - 2904117 | 23682.5 |
| ycgl domain | SAMEA3710568_02983 | Not Available | Negative | 2904189 - 2904482 | 11204.6 |
| peptidase domain-containing protein | SAMEA3710568_02984 | Not Available | Positive | 2904724 - 2904864 | 4941.04 |
| glutamate dehydrogenase | SAMEA3710568_02985 | Not Available | Positive | 2905991 - 2907157 | 41381.7 |
| inner membrane protein ynji | SAMEA3710568_02986 | Not Available | Negative | 2907274 - 2908314 | 40274.3 |
| dna topoisomerase | SAMEA3710568_02987 | Not Available | Negative | 2908441 - 2910402 | 73178.8 |
| selenophosphate synthetase | SAMEA3710568_02988 | Not Available | Negative | 2910407 - 2911450 | 36719.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





