Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3710568_02968 | Not Available | Positive | 2891862 - 2892089 | 8844.33 |
| alanine racemase | SAMEA3710568_02969 | Not Available | Negative | 2892257 - 2893327 | 38802.9 |
| d-amino acid dehydrogenase small subunit | SAMEA3710568_02970 | Not Available | Negative | 2893337 - 2894635 | 47570.9 |
| spovr family protein | SAMEA3710568_02971 | Not Available | Positive | 2894965 - 2895939 | 38470.9 |
| spovr family protein | SAMEA3710568_02972 | Not Available | Positive | 2895914 - 2896498 | 23107.2 |
| fatty acid metabolism regulator protein | SAMEA3710568_02973 | Not Available | Negative | 2896550 - 2897269 | 26970.2 |
| sodium/proton antiporter | SAMEA3710568_02974 | Not Available | Positive | 2897490 - 2899031 | 56717.7 |
| disulfide bond formation protein b | SAMEA3710568_02975 | Not Available | Positive | 2899177 - 2899707 | 20161.3 |
| mutagenesis and repair protein | SAMEA3710568_02976 | Not Available | Negative | 2899753 - 2901021 | 47688.4 |
| dna polymerase v subunit umud | SAMEA3710568_02977 | Not Available | Negative | 2901021 - 2901440 | 15064.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





