Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdenum transport protein modd | SAMEA3710568_02958 | Not Available | Positive | 2882533 - 2883387 | 30351.7 |
| outer membrane receptor | SAMEA3710568_02959 | Not Available | Positive | 2883413 - 2883970 | 19903.2 |
| outer membrane receptor | SAMEA3710568_02960 | Not Available | Positive | 2883946 - 2885367 | 53635.6 |
| transglycosylase | SAMEA3710568_02961 | Not Available | Negative | 2885417 - 2885671 | 8747.28 |
| putative type iv pilus assembly protein pilz | SAMEA3710568_02962 | Not Available | Positive | 2885872 - 2886606 | 27846.7 |
| membrane-bound lytic murein transglycosylase e | SAMEA3710568_02963 | Not Available | Negative | 2886608 - 2887219 | 22213.7 |
| l,d-carboxypeptidase a | SAMEA3710568_02964 | Not Available | Positive | 2887319 - 2888233 | 33486.4 |
| potassium/proton antiporter | SAMEA3710568_02965 | Not Available | Positive | 2888328 - 2890064 | 62209.1 |
| uncharacterised protein | SAMEA3710568_02966 | Not Available | Positive | 2890568 - 2890828 | 9239.81 |
| invasion plasmid antigen | SAMEA3710568_02967 | Not Available | Positive | 2890791 - 2891825 | 39613.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





