Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-ketoacyl-acp reductase | SAMEA3710568_02927 | Not Available | Negative | 2850417 - 2851208 | 28553.5 |
| tetr family transcriptional regulator | SAMEA3710568_02928 | Not Available | Positive | 2851420 - 2852067 | 24725.7 |
| opacity-associated family protein | SAMEA3710568_02929 | Not Available | Negative | 2852051 - 2852596 | 20120.0 |
| fkbp-type peptidylprolyl isomerase | SAMEA3710568_02930 | Not Available | Positive | 2852815 - 2853435 | 22217.5 |
| d-alanine/d-serine/glycine permease | SAMEA3710568_02931 | Not Available | Positive | 2853743 - 2855155 | 51648.6 |
| iron-sulfur cluster repair di-iron protein | SAMEA3710568_02932 | Not Available | Negative | 2855200 - 2855862 | 24884.1 |
| transmembrane subunit | SAMEA3710568_02933 | Not Available | Negative | 2855970 - 2856935 | 35249.6 |
| nmra family protein | SAMEA3710568_02934 | Not Available | Negative | 2857044 - 2857904 | 29774.2 |
| putative transcriptional regulator | SAMEA3710568_02935 | Not Available | Positive | 2857993 - 2858373 | 14076.0 |
| bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein | SAMEA3710568_02936 | Not Available | Negative | 2858499 - 2860442 | 70836.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





