Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein | SAMEA3710568_02917 | Not Available | Positive | 2840567 - 2841457 | 34643.5 |
| ribonuclease z | SAMEA3710568_02918 | Not Available | Positive | 2841565 - 2842395 | 30089.4 |
| 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component | SAMEA3710568_02919 | Not Available | Positive | 2842648 - 2843157 | 19342.7 |
| 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component | SAMEA3710568_02920 | Not Available | Positive | 2843154 - 2844206 | 39422.4 |
| 4-hydroxyphenylacetate 3-monooxygenase, reductase component | SAMEA3710568_02921 | Not Available | Positive | 2844224 - 2844736 | 18503.6 |
| carbon starvation family protein | SAMEA3710568_02922 | Not Available | Positive | 2845129 - 2847279 | 77314.5 |
| uncharacterized small protein | SAMEA3710568_02923 | Not Available | Positive | 2847329 - 2847532 | 7729.24 |
| putative gtp-binding protein yjia | SAMEA3710568_02924 | Not Available | Positive | 2847543 - 2848499 | 35651.8 |
| protein of uncharacterised function (duf1524) | SAMEA3710568_02925 | Not Available | Negative | 2848568 - 2849224 | 25735.0 |
| putative alpha-mannosidase | SAMEA3710568_02926 | Not Available | Negative | 2849523 - 2850407 | 32720.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





