Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator adiy | SAMEA3710568_02887 | Not Available | Negative | 2805760 - 2806521 | 29022.4 |
| biodegradative arginine decarboxylase | SAMEA3710568_02888 | Not Available | Negative | 2806846 - 2809116 | 84667.2 |
| dna-binding transcriptional regulator melr | SAMEA3710568_02889 | Not Available | Negative | 2809312 - 2810220 | 34959.9 |
| alpha-galactosidase | SAMEA3710568_02890 | Not Available | Positive | 2810503 - 2811858 | 50717.0 |
| melibiose permease ii | SAMEA3710568_02891 | Not Available | Positive | 2811973 - 2813382 | 52198.9 |
| inner membrane protein yjdf | SAMEA3710568_02892 | Not Available | Negative | 2813521 - 2814150 | 23366.4 |
| fumarase b | SAMEA3710568_02893 | Not Available | Negative | 2814273 - 2815919 | 60107.7 |
| anaerobic c4-dicarboxylate transporter | SAMEA3710568_02894 | Not Available | Negative | 2815997 - 2817337 | 47938.2 |
| dna-binding transcriptional activator dcur | SAMEA3710568_02895 | Not Available | Negative | 2817908 - 2818627 | 27459.9 |
| sensory histidine kinase dcus | SAMEA3710568_02896 | Not Available | Negative | 2818624 - 2820255 | 60503.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





