Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate abc transporter periplasmic phosphonate-binding protein | SAMEA3710568_02876 | Not Available | Negative | 2792426 - 2793442 | 37384.6 |
| phosphonate/organophosphate ester transporter subunit | SAMEA3710568_02877 | Not Available | Negative | 2793467 - 2794255 | 29410.4 |
| uncharacterized protein conserved in bacteria | SAMEA3710568_02878 | Not Available | Negative | 2794388 - 2794831 | 16154.1 |
| putative alkylphosphonate uptake protein in phosphonate metabolism | SAMEA3710568_02879 | Not Available | Negative | 2794989 - 2795324 | 12345.7 |
| putative vimentin | SAMEA3710568_02880 | Not Available | Positive | 2795727 - 2797955 | 84274.7 |
| uncharacterised protein | SAMEA3710568_02881 | Not Available | Positive | 2797952 - 2798830 | 32915.6 |
| proline/glycine betaine transporter | SAMEA3710568_02882 | Not Available | Positive | 2799094 - 2800596 | 54892.3 |
| dna-binding transcriptional regulator basr | SAMEA3710568_02884 | Not Available | Negative | 2801874 - 2802542 | 25046.3 |
| cell division protein | SAMEA3710568_02885 | Not Available | Negative | 2802539 - 2804182 | 61741.7 |
| arginine:agmatin antiporter | SAMEA3710568_02886 | Not Available | Negative | 2804286 - 2805623 | 46845.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





