Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pentapeptide repeat protein | SAMEA3710568_02835 | Not Available | Positive | 2754501 - 2755793 | 49194.9 |
| na+/h+ antiporter | SAMEA3710568_02836 | Not Available | Negative | 2755947 - 2757596 | 60527.5 |
| inorganic anion transporter, sulfate permease (sulp) family | SAMEA3710568_02837 | Not Available | Negative | 2757747 - 2759096 | 45686.4 |
| redox-sensitive transcriptional activator soxr | SAMEA3710568_02839 | Not Available | Negative | 2759802 - 2760266 | 17150.7 |
| dna-binding transcriptional regulator soxs | SAMEA3710568_02840 | Not Available | Positive | 2760352 - 2760675 | 12881.6 |
| signal transduction protein | SAMEA3710568_02841 | Not Available | Negative | 2760678 - 2761010 | 12668.4 |
| signal transduction protein | SAMEA3710568_02842 | Not Available | Negative | 2761000 - 2761770 | 29283.5 |
| signal transduction protein | SAMEA3710568_02843 | Not Available | Negative | 2761938 - 2762255 | 12210.1 |
| uncharacterised protein | SAMEA3710568_02844 | Not Available | Positive | 2762684 - 2762965 | 10304.0 |
| outer membrane phosphoporin protein e | SAMEA3710568_02845 | Not Available | Positive | 2763330 - 2764385 | 38912.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





