Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate-dependent nitrite reductase complex subunit nrff | SAMEA3710568_02825 | Not Available | Negative | 2744030 - 2744413 | 14559.0 |
| heme lyase subunit nrfe | SAMEA3710568_02826 | Not Available | Negative | 2744406 - 2746028 | 60281.9 |
| nrfd protein | SAMEA3710568_02827 | Not Available | Negative | 2746144 - 2747100 | 34993.3 |
| cytochrome c nitrite reductase, fe-s protein | SAMEA3710568_02828 | Not Available | Negative | 2747097 - 2747768 | 24568.8 |
| cytochrome c nitrite reductase pentaheme subunit | SAMEA3710568_02829 | Not Available | Negative | 2747765 - 2748331 | 20659.6 |
| cytochrome c-552 precursor | SAMEA3710568_02830 | Not Available | Negative | 2748376 - 2749812 | 53745.7 |
| acetyl-coa synthetase | SAMEA3710568_02831 | Not Available | Positive | 2750205 - 2750951 | 27746.0 |
| acetyl-coa synthetase | SAMEA3710568_02832 | Not Available | Positive | 2750961 - 2752163 | 43930.0 |
| inner membrane protein yjch | SAMEA3710568_02833 | Not Available | Positive | 2752363 - 2752677 | 11672.3 |
| acetate permease | SAMEA3710568_02834 | Not Available | Positive | 2752674 - 2754323 | 59166.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





