Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction dna helicase ruva | SAMEA3710568_02782 | Not Available | Positive | 2709249 - 2709860 | 22117.0 |
| holliday junction dna helicase ruvb | SAMEA3710568_02783 | Not Available | Positive | 2709869 - 2710879 | 37191.0 |
| high-affinity zinc transporter membrane protein | SAMEA3710568_02784 | Not Available | Negative | 2711026 - 2711811 | 27750.4 |
| high-affinity zinc transporter atpase | SAMEA3710568_02785 | Not Available | Negative | 2711808 - 2712563 | 27816.2 |
| adhesin | SAMEA3710568_02786 | Not Available | Positive | 2712588 - 2713574 | 35977.2 |
| peptidase | SAMEA3710568_02787 | Not Available | Positive | 2713590 - 2714912 | 49060.6 |
| lipid a biosynthesis (kdo)2-(lauroyl)-lipid iva acyltransferase 1 | SAMEA3710568_02788 | Not Available | Positive | 2715032 - 2716003 | 37412.5 |
| pyruvate kinase | SAMEA3710568_02789 | Not Available | Negative | 2716134 - 2717576 | 51322.3 |
| dna-binding transcriptional regulator hexr | SAMEA3710568_02790 | Not Available | Negative | 2717704 - 2718573 | 31959.3 |
| uncharacterised protein | SAMEA3710568_02791 | Not Available | Positive | 2718596 - 2718745 | 5714.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





