Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative cytochrome oxidase subunit | SAMEA3710568_02762 | Not Available | Positive | 2691264 - 2691587 | 12018.0 |
| cell division protein ftsb | SAMEA3710568_02763 | Not Available | Positive | 2691781 - 2692092 | 11607.8 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | SAMEA3710568_02764 | Not Available | Positive | 2692111 - 2692821 | 25739.7 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SAMEA3710568_02765 | Not Available | Positive | 2692821 - 2693300 | 16898.6 |
| trna pseudouridine synthase d | SAMEA3710568_02766 | Not Available | Positive | 2693297 - 2694346 | 39094.7 |
| stationary phase survival protein sure | SAMEA3710568_02767 | Not Available | Positive | 2694327 - 2695088 | 26981.1 |
| protein-l-isoaspartate o-methyltransferase | SAMEA3710568_02768 | Not Available | Positive | 2695082 - 2695708 | 23259.2 |
| lipoprotein nlpd | SAMEA3710568_02769 | Not Available | Positive | 2695848 - 2696987 | 40151.3 |
| rna polymerase sigma factor | SAMEA3710568_02770 | Not Available | Positive | 2697050 - 2698042 | 37974.1 |
| transcriptional regulator | SAMEA3710568_02771 | Not Available | Negative | 2698162 - 2698569 | 15498.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





