Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative colanic acid biosynthesis acetyltransferase wcab | SAMEA3710568_02719 | Not Available | Negative | 2645339 - 2645827 | 17616.6 |
| glycosyl transferase family protein | SAMEA3710568_02720 | Not Available | Negative | 2645830 - 2646102 | 10879.2 |
| glycosyl transferase family protein | SAMEA3710568_02721 | Not Available | Negative | 2646289 - 2646669 | 14629.3 |
| tyrosine kinase | SAMEA3710568_02722 | Not Available | Negative | 2646762 - 2648924 | 79442.9 |
| tyrosine phosphatase | SAMEA3710568_02723 | Not Available | Negative | 2648927 - 2649370 | 16707.3 |
| polysaccharide biosynthesis/export protein | SAMEA3710568_02724 | Not Available | Negative | 2649376 - 2650515 | 41926.4 |
| transporter | SAMEA3710568_02726 | Not Available | Positive | 2651174 - 2652757 | 59453.0 |
| assembly protein | SAMEA3710568_02727 | Not Available | Negative | 2653209 - 2655062 | 68983.0 |
| deoxycytidine triphosphate deaminase | SAMEA3710568_02728 | Not Available | Negative | 2655084 - 2655665 | 21222.4 |
| uridine/cytidine kinase | SAMEA3710568_02729 | Not Available | Negative | 2655757 - 2656398 | 24354.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





