Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 orf2 | SAMEA3710568_02685 | Not Available | Negative | 2609398 - 2609889 | 18953.6 |
| is3 orfb | SAMEA3710568_02686 | Not Available | Negative | 2609861 - 2610253 | 15021.3 |
| putative transposase | SAMEA3710568_02687 | Not Available | Negative | 2610250 - 2610549 | 11405.7 |
| shic | SAMEA3710568_02688 | Not Available | Positive | 2610734 - 2611252 | 20744.4 |
| is629 orf2 | SAMEA3710568_02689 | Not Available | Negative | 2611333 - 2611704 | 13766.1 |
| mfs family transporter protein | SAMEA3710568_02690 | Not Available | Negative | 2612102 - 2613250 | 41448.2 |
| protein ycac | SAMEA3710568_02691 | Not Available | Positive | 2613565 - 2614191 | 23105.6 |
| anaerobic dimethyl sulfoxide reductase subunit c | SAMEA3710568_02692 | Not Available | Negative | 2614227 - 2615018 | 28347.0 |
| dimethylsulfoxide reductase subunit b | SAMEA3710568_02693 | Not Available | Negative | 2615020 - 2615637 | 22870.1 |
| anaerobic dimethyl sulfoxide reductase subunit a | SAMEA3710568_02694 | Not Available | Negative | 2615648 - 2617765 | 78688.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





