Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium/glutamate symporter | SAMEA3710568_02675 | Not Available | Negative | 2596630 - 2597835 | 42427.9 |
| xanthine permease | SAMEA3710568_02676 | Not Available | Positive | 2598115 - 2599506 | 48871.2 |
| asma family protein | SAMEA3710568_02677 | Not Available | Positive | 2599627 - 2601336 | 62228.8 |
| alpha-xylosidase | SAMEA3710568_02678 | Not Available | Negative | 2601389 - 2603707 | 88027.0 |
| putative transporter | SAMEA3710568_02679 | Not Available | Negative | 2603717 - 2604703 | 36410.3 |
| putative transporter | SAMEA3710568_02680 | Not Available | Negative | 2604681 - 2605100 | 15805.6 |
| Trna-sec(p) | Not Available | Not Available | Positive | 2605393 - 2605483 | Not Available |
| sai integrase | SAMEA3710568_02682 | Not Available | Positive | 2605759 - 2606970 | 46316.3 |
| shia-like protein | SAMEA3710568_02683 | Not Available | Positive | 2607382 - 2608425 | 40290.6 |
| putative superfamily i dna helicase | SAMEA3710568_02684 | Not Available | Positive | 2608940 - 2609401 | 17276.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





