Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease ph | SAMEA3710568_02665 | Not Available | Negative | 2585137 - 2585853 | 25327.4 |
| putative stress-induced protein | SAMEA3710568_02666 | Not Available | Positive | 2585980 - 2586843 | 33160.9 |
| dna-damage-inducible protein | SAMEA3710568_02667 | Not Available | Positive | 2587064 - 2587888 | 30982.8 |
| inner membrane protein yicg | SAMEA3710568_02668 | Not Available | Positive | 2588179 - 2588796 | 22049.8 |
| dna ligase b | SAMEA3710568_02669 | Not Available | Negative | 2588793 - 2590475 | 63264.0 |
| guanylate kinase | SAMEA3710568_02670 | Not Available | Positive | 2590733 - 2591356 | 23594.1 |
| dna-directed rna polymerase subunit omega | SAMEA3710568_02671 | Not Available | Positive | 2591411 - 2591686 | 10222.2 |
| bifunctional (p)ppgpp synthetase ii/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | SAMEA3710568_02672 | Not Available | Positive | 2591705 - 2593813 | 79333.1 |
| trna guanosine-2'-o-methyltransferase | SAMEA3710568_02673 | Not Available | Positive | 2593820 - 2594509 | 25344.6 |
| atp-dependent dna helicase recg | SAMEA3710568_02674 | Not Available | Positive | 2594515 - 2596596 | 76481.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





