Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-manno-octulosonic-acid transferase | SAMEA3710568_02655 | Not Available | Positive | 2577843 - 2579120 | 47277.9 |
| phosphopantetheine adenylyltransferase | SAMEA3710568_02656 | Not Available | Positive | 2579128 - 2579607 | 17837.7 |
| formamidopyrimidine-dna glycosylase | SAMEA3710568_02657 | Not Available | Negative | 2579646 - 2580455 | 30261.8 |
| 50s ribosomal protein l33 | SAMEA3710568_02658 | Not Available | Negative | 2580553 - 2580720 | 6371.94 |
| 50s ribosomal protein l28 | SAMEA3710568_02659 | Not Available | Negative | 2580741 - 2580977 | 9007.02 |
| dna repair protein radc | SAMEA3710568_02660 | Not Available | Negative | 2581194 - 2581862 | 25259.9 |
| flavoprotein | SAMEA3710568_02661 | Not Available | Positive | 2582034 - 2583254 | 43440.7 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | SAMEA3710568_02662 | Not Available | Positive | 2583232 - 2583690 | 16387.8 |
| transcriptional regulator | SAMEA3710568_02663 | Not Available | Positive | 2583797 - 2584393 | 22837.7 |
| orotate phosphoribosyltransferase | SAMEA3710568_02664 | Not Available | Negative | 2584430 - 2585071 | 23558.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





