Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ipgb1 | SAMEA3710568_02645 | Not Available | Positive | 2566158 - 2566784 | 23657.6 |
| chaperone protein ipgc | SAMEA3710568_02646 | Not Available | Positive | 2566841 - 2567308 | 17757.1 |
| ipab | SAMEA3710568_02647 | Not Available | Positive | 2567314 - 2569056 | 62175.0 |
| invasin protein ipac | SAMEA3710568_02648 | Not Available | Positive | 2569076 - 2570167 | 38820.7 |
| invasin protein ipad | SAMEA3710568_02649 | Not Available | Positive | 2570218 - 2571216 | 36663.9 |
| invasin protein ipaa | SAMEA3710568_02650 | Not Available | Positive | 2571225 - 2573126 | 70069.1 |
| acyl carrier protein | SAMEA3710568_02651 | Not Available | Positive | 2573130 - 2573366 | 8805.76 |
| virulence regulon transcriptional activator virb | SAMEA3710568_02652 | Not Available | Positive | 2573583 - 2574512 | 35409.9 |
| ipaj, invasion plasmid antigen | SAMEA3710568_02653 | Not Available | Negative | 2575455 - 2576138 | 25191.2 |
| uncharacterised protein | SAMEA3710568_02654 | Not Available | Negative | 2577148 - 2577345 | 7485.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





