Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion apparatus protein mxik | SAMEA3710568_02635 | Not Available | Negative | 2558552 - 2559079 | 20056.3 |
| type iii secretion apparatus lipoprotein, yscj/hrcj family | SAMEA3710568_02636 | Not Available | Negative | 2559076 - 2559801 | 27510.7 |
| protein mxii | SAMEA3710568_02637 | Not Available | Negative | 2559807 - 2560100 | 10633.7 |
| type iii secretion apparatus needle protein mxih | SAMEA3710568_02638 | Not Available | Negative | 2560113 - 2560364 | 9265.8 |
| mxig | SAMEA3710568_02639 | Not Available | Negative | 2560372 - 2561487 | 43004.3 |
| protein ipgf | SAMEA3710568_02640 | Not Available | Negative | 2561496 - 2561954 | 17607.3 |
| chaperone protein ipge | SAMEA3710568_02641 | Not Available | Negative | 2561954 - 2562316 | 13733.4 |
| inositol phosphate phosphatase ipgd | SAMEA3710568_02642 | Not Available | Negative | 2562326 - 2563942 | 59825.3 |
| virulence protein icsb | SAMEA3710568_02643 | Not Available | Positive | 2564256 - 2565740 | 56423.4 |
| chaperone protein ipga | SAMEA3710568_02644 | Not Available | Positive | 2565753 - 2566142 | 15086.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





