Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| surface presentation of antigens protein spam | SAMEA3710568_02625 | Not Available | Negative | 2549354 - 2549692 | 13208.3 |
| atp synthase spal | SAMEA3710568_02626 | Not Available | Negative | 2549785 - 2551077 | 47521.0 |
| surface presentation of antigens protein spak | SAMEA3710568_02627 | Not Available | Negative | 2551081 - 2551482 | 15117.3 |
| mxia | SAMEA3710568_02628 | Not Available | Negative | 2551495 - 2553555 | 76149.5 |
| mxic | SAMEA3710568_02629 | Not Available | Negative | 2553568 - 2554635 | 40193.6 |
| type iii secretion outer membrane protein mxid | SAMEA3710568_02630 | Not Available | Negative | 2554654 - 2556354 | 63190.4 |
| transcriptional regulator mxie | SAMEA3710568_02631 | Not Available | Negative | 2556341 - 2556973 | 24553.4 |
| lipoprotein mxim | SAMEA3710568_02632 | Not Available | Negative | 2557103 - 2557531 | 15853.5 |
| mxil | SAMEA3710568_02633 | Not Available | Negative | 2557515 - 2557922 | 15625.0 |
| mxin | SAMEA3710568_02634 | Not Available | Negative | 2557915 - 2558595 | 26245.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





