Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted periplasmic protein (duf2233) | SAMEA3710568_02615 | Not Available | Positive | 2542785 - 2543123 | 12355.1 |
| is600 orf2 | SAMEA3710568_02616 | Not Available | Positive | 2543394 - 2544047 | 24625.5 |
| transposase | SAMEA3710568_02617 | Not Available | Negative | 2544004 - 2544114 | 3997.9 |
| biofilm development protein ymgb/arir | SAMEA3710568_02618 | Not Available | Negative | 2544624 - 2544857 | 8687.49 |
| surface presentation of antigens protein spas | SAMEA3710568_02619 | Not Available | Negative | 2544879 - 2545907 | 39854.7 |
| spa29 | SAMEA3710568_02620 | Not Available | Negative | 2545914 - 2546684 | 28485.5 |
| spa9 | SAMEA3710568_02621 | Not Available | Negative | 2546684 - 2546944 | 9430.03 |
| surface presentation of antigens protein spap | SAMEA3710568_02622 | Not Available | Negative | 2546959 - 2547609 | 24201.1 |
| spa33 | SAMEA3710568_02623 | Not Available | Negative | 2547614 - 2548495 | 33393.3 |
| surface presentation of antigens protein span | SAMEA3710568_02624 | Not Available | Negative | 2548489 - 2549367 | 32979.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





