Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysophospholipase l2 | SAMEA3710568_02605 | Not Available | Negative | 2533651 - 2534673 | 39011.5 |
| homoserine/homoserine lactone efflux protein | SAMEA3710568_02606 | Not Available | Positive | 2534784 - 2535404 | 22428.2 |
| threonine efflux system | SAMEA3710568_02607 | Not Available | Negative | 2535466 - 2536086 | 22533.5 |
| atp-dependent dna helicase recq | SAMEA3710568_02608 | Not Available | Negative | 2536150 - 2537985 | 68608.9 |
| phospholipase a | SAMEA3710568_02609 | Not Available | Negative | 2538112 - 2538981 | 33164.9 |
| thioesterase family protein | SAMEA3710568_02610 | Not Available | Positive | 2539146 - 2539613 | 17163.8 |
| rard protein | SAMEA3710568_02611 | Not Available | Positive | 2539665 - 2540555 | 33315.1 |
| inner membrane protein yigg | SAMEA3710568_02612 | Not Available | Positive | 2540650 - 2541030 | 14418.1 |
| protein of uncharacterised function (duf2628) | SAMEA3710568_02613 | Not Available | Positive | 2541044 - 2541424 | 14608.0 |
| magnesium/nickel/cobalt transporter cora | SAMEA3710568_02614 | Not Available | Negative | 2541465 - 2542415 | 36591.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





