Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative ubiquinone biosynthesis protein ubib | SAMEA3710568_02595 | Not Available | Negative | 2521979 - 2523619 | 63206.4 |
| sterol-binding domain-containing protein | SAMEA3710568_02596 | Not Available | Negative | 2523616 - 2524221 | 22153.8 |
| ubiquinone/menaquinone biosynthesis methyltransferase | SAMEA3710568_02597 | Not Available | Negative | 2524235 - 2524990 | 28074.8 |
| dna recombination protein rmuc | SAMEA3710568_02598 | Not Available | Negative | 2525085 - 2526512 | 54767.6 |
| uridine phosphorylase | SAMEA3710568_02599 | Not Available | Negative | 2526653 - 2527414 | 27188.7 |
| putative dienelactone hydrolase-like enzyme | SAMEA3710568_02600 | Not Available | Positive | 2527676 - 2528491 | 29469.8 |
| 5- methyltetrahydropteroyltriglutamate/homocysteine s-methyltransferase | SAMEA3710568_02601 | Not Available | Negative | 2528530 - 2530791 | 84768.2 |
| protein metr | SAMEA3710568_02602 | Not Available | Positive | 2531027 - 2531980 | 35559.0 |
| drug/metabolite exporter (dme) family protein | SAMEA3710568_02603 | Not Available | Negative | 2531868 - 2532767 | 33785.0 |
| hydrolase | SAMEA3710568_02604 | Not Available | Negative | 2532843 - 2533643 | 29723.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





