Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline dipeptidase | SAMEA3710568_02585 | Not Available | Negative | 2511542 - 2512873 | 50238.9 |
| multifunctional fatty acid oxidation complex subunit alpha | SAMEA3710568_02586 | Not Available | Positive | 2513063 - 2515252 | 79644.5 |
| 3-ketoacyl-coa thiolase | SAMEA3710568_02587 | Not Available | Positive | 2515262 - 2516425 | 40878.7 |
| ferrisiderophore reductase, flavin reductase | SAMEA3710568_02588 | Not Available | Negative | 2516617 - 2517318 | 26201.5 |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | SAMEA3710568_02589 | Not Available | Negative | 2517364 - 2518857 | 55618.9 |
| transcriptional activator rfah | SAMEA3710568_02590 | Not Available | Positive | 2519024 - 2519512 | 18310.2 |
| dnase tatd | SAMEA3710568_02591 | Not Available | Negative | 2519509 - 2520291 | 29061.7 |
| twin-arginine protein translocation system subunit tatc | SAMEA3710568_02592 | Not Available | Negative | 2520333 - 2521109 | 28867.9 |
| sec-independent translocase | SAMEA3710568_02593 | Not Available | Negative | 2521112 - 2521627 | 18421.8 |
| twin arginine translocase protein a | SAMEA3710568_02594 | Not Available | Negative | 2521631 - 2521900 | 9664.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





