Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative acyltransferase | SAMEA3710568_02544 | Not Available | Negative | 2471572 - 2472033 | 17420.7 |
| ribonuclease z | SAMEA3710568_02545 | Not Available | Positive | 2472080 - 2473015 | 33704.5 |
| putative sulfatase/phosphatase | SAMEA3710568_02546 | Not Available | Positive | 2473206 - 2473400 | 7084.38 |
| outer membrane fimbrial user protein | SAMEA3710568_02547 | Not Available | Positive | 2473815 - 2475806 | 72646.9 |
| pilus biogenesis initiator, cbld family | SAMEA3710568_02548 | Not Available | Positive | 2475803 - 2476891 | 40473.1 |
| transport of hexuronates | SAMEA3710568_02549 | Not Available | Negative | 2476979 - 2478277 | 46895.0 |
| glucuronate isomerase | SAMEA3710568_02550 | Not Available | Positive | 2478762 - 2480174 | 53990.1 |
| altronate dehydratase | SAMEA3710568_02551 | Not Available | Positive | 2480189 - 2481676 | 54083.2 |
| putative inner membrane protein | SAMEA3710568_02552 | Not Available | Positive | 2481759 - 2482310 | 20590.8 |
| serine/threonine transporter sstt | SAMEA3710568_02553 | Not Available | Negative | 2482315 - 2483559 | 43514.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





