Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| smr family multidrug resistance protein | SAMEA3710568_02534 | Not Available | Positive | 2463046 - 2463381 | 12224.8 |
| putative transport/receptor protein | SAMEA3710568_02535 | Not Available | Positive | 2463381 - 2463767 | 14114.1 |
| polymyxin resistance protein b | SAMEA3710568_02536 | Not Available | Negative | 2463761 - 2463970 | 7502.04 |
| o-succinylbenzoic acid--coa ligase | SAMEA3710568_02537 | Not Available | Negative | 2464138 - 2465493 | 50099.5 |
| o-succinylbenzoate synthase | SAMEA3710568_02538 | Not Available | Negative | 2465490 - 2466452 | 35496.5 |
| naphthoate synthase | SAMEA3710568_02539 | Not Available | Negative | 2466452 - 2467309 | 31618.8 |
| acyl-coa thioester hydrolase yfbb | SAMEA3710568_02540 | Not Available | Negative | 2467324 - 2468082 | 27731.0 |
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acid synthase/2- oxoglutarate decarboxylase | SAMEA3710568_02541 | Not Available | Negative | 2468079 - 2469749 | 61335.4 |
| isochorismate synthase, menaquinone-specific | SAMEA3710568_02542 | Not Available | Negative | 2469838 - 2471133 | 48762.2 |
| bacterial protein of uncharacterised function (duf883) | SAMEA3710568_02543 | Not Available | Negative | 2471212 - 2471517 | 11287.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





