Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase | SAMEA3710568_02524 | Not Available | Negative | 2452409 - 2452798 | 13726.5 |
| cina family protein | SAMEA3710568_02525 | Not Available | Negative | 2452934 - 2454136 | 44268.3 |
| outer membrane protein, yfaz | SAMEA3710568_02526 | Not Available | Negative | 2454223 - 2454765 | 18612.8 |
| hydrolase, nudix family | SAMEA3710568_02527 | Not Available | Positive | 2455044 - 2455469 | 16361.6 |
| protein induced by aluminum | SAMEA3710568_02528 | Not Available | Negative | 2455508 - 2456110 | 22319.8 |
| degt/dnrj/eryc1/strs aminotransferase | SAMEA3710568_02529 | Not Available | Positive | 2456400 - 2457557 | 42260.0 |
| undecaprenyl phosphate 4-deoxy-4-formamido-l-arabinose transferase | SAMEA3710568_02530 | Not Available | Positive | 2457561 - 2458529 | 36341.3 |
| bifunctional udp-glucuronic acid decarboxylase/udp-4-amino-4-deoxy-l-arabinose formyltransferase | SAMEA3710568_02531 | Not Available | Positive | 2458960 - 2460510 | 58398.0 |
| polysaccharide deacetylase domain-containing protein | SAMEA3710568_02532 | Not Available | Positive | 2460507 - 2461397 | 33065.6 |
| 4-amino-4-deoxy-l-arabinose transferase | SAMEA3710568_02533 | Not Available | Positive | 2461397 - 2463049 | 62526.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





