Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ycfr | SAMEA3710568_02483 | Not Available | Positive | 2406514 - 2406774 | 8568.2 |
| putative dehydrogenase | SAMEA3710568_02484 | Not Available | Negative | 2407003 - 2408088 | 38918.3 |
| glycosyl transferase family protein | SAMEA3710568_02485 | Not Available | Negative | 2408229 - 2409191 | 34985.5 |
| probably atp-dependent helicase | SAMEA3710568_02486 | Not Available | Negative | 2409219 - 2411504 | 86735.6 |
| swarming motility protein ybia | SAMEA3710568_02487 | Not Available | Positive | 2411522 - 2411971 | 17313.6 |
| atp-dependent rna helicase rhle | SAMEA3710568_02488 | Not Available | Negative | 2412145 - 2413365 | 45193.0 |
| dna-binding transcriptional regulator | SAMEA3710568_02489 | Not Available | Positive | 2413594 - 2414265 | 25018.1 |
| efflux pump membrane fusion protein | SAMEA3710568_02490 | Not Available | Positive | 2414268 - 2415263 | 36287.7 |
| atpase | SAMEA3710568_02491 | Not Available | Positive | 2415256 - 2416992 | 63136.3 |
| putative abc transporter permease | SAMEA3710568_02492 | Not Available | Positive | 2416985 - 2418118 | 42059.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





