Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamin biosynthesis, thiazole moiety | SAMEA3710568_02462 | Not Available | Negative | 2387631 - 2388386 | 26872.3 |
| thiamine-phosphate pyrophosphorylase | SAMEA3710568_02463 | Not Available | Negative | 2388379 - 2389014 | 23042.7 |
| thiamine biosynthesis protein thic | SAMEA3710568_02464 | Not Available | Negative | 2389014 - 2390909 | 70889.4 |
| anti-rna polymerase sigma 70 factor | SAMEA3710568_02466 | Not Available | Negative | 2391143 - 2391619 | 18243.9 |
| nadh pyrophosphatase | SAMEA3710568_02467 | Not Available | Positive | 2391714 - 2392487 | 29704.6 |
| uroporphyrinogen decarboxylase | SAMEA3710568_02468 | Not Available | Positive | 2392527 - 2393591 | 39231.4 |
| endonuclease v | SAMEA3710568_02469 | Not Available | Positive | 2393748 - 2394419 | 24619.9 |
| protein of uncharacterised function (duf416) | SAMEA3710568_02470 | Not Available | Positive | 2394462 - 2395052 | 22599.9 |
| transcriptional regulator hu subunit alpha | SAMEA3710568_02471 | Not Available | Positive | 2395239 - 2395511 | 9535.51 |
| protein of uncharacterised function (duf1481) | SAMEA3710568_02472 | Not Available | Positive | 2395584 - 2396219 | 24031.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





