Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | SAMEA3710568_02430 | Not Available | Positive | 2360303 - 2361199 | 33215.3 |
| putative cytochrome | SAMEA3710568_02431 | Not Available | Negative | 2361406 - 2361774 | 14453.9 |
| transferase | SAMEA3710568_02432 | Not Available | Negative | 2362067 - 2363053 | 37410.1 |
| putative inner membrane protein yqjf | SAMEA3710568_02433 | Not Available | Negative | 2363123 - 2363509 | 13802.2 |
| uncharacterised protein | SAMEA3710568_02434 | Not Available | Negative | 2363605 - 2363904 | 11781.4 |
| inner membrane protein yqje | SAMEA3710568_02435 | Not Available | Negative | 2363894 - 2364298 | 15148.0 |
| bacterial protein of uncharacterised function (duf883) | SAMEA3710568_02436 | Not Available | Negative | 2364301 - 2364606 | 11052.1 |
| protein of uncharacterised function (duf1090) | SAMEA3710568_02437 | Not Available | Negative | 2364564 - 2364998 | 16239.3 |
| envz/ompr regulon moderator | SAMEA3710568_02438 | Not Available | Negative | 2365145 - 2365528 | 14203.0 |
| putative inner membrane protein | SAMEA3710568_02439 | Not Available | Negative | 2365532 - 2366194 | 24587.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





