Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine dehydratase | SAMEA3710568_02420 | Not Available | Positive | 2348411 - 2349400 | 35234.5 |
| threonine/serine transporter tdcc | SAMEA3710568_02421 | Not Available | Positive | 2349422 - 2350753 | 48895.8 |
| propionate/acetate kinase | SAMEA3710568_02422 | Not Available | Positive | 2350779 - 2351987 | 43425.7 |
| formate acetyltransferase | SAMEA3710568_02423 | Not Available | Positive | 2352021 - 2354315 | 85913.3 |
| endoribonuclease l-psp | SAMEA3710568_02424 | Not Available | Positive | 2354329 - 2354718 | 14008.0 |
| l-serine deaminase | SAMEA3710568_02425 | Not Available | Positive | 2354790 - 2356154 | 48413.5 |
| serine transporter family protein | SAMEA3710568_02426 | Not Available | Positive | 2356429 - 2357760 | 48391.7 |
| serine dehydratase alpha chain | SAMEA3710568_02427 | Not Available | Positive | 2357788 - 2359098 | 45412.9 |
| uncharacterised protein | SAMEA3710568_02428 | Not Available | Negative | 2359310 - 2359474 | 5937.04 |
| pirin family protein | SAMEA3710568_02429 | Not Available | Negative | 2359497 - 2360198 | 25985.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





