Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine abc transporter periplasmic substrate-binding protein artj | SAMEA3710568_02378 | Not Available | Positive | 2313032 - 2313763 | 26873.9 |
| 23s rrna methyluridine methyltransferase | SAMEA3710568_02379 | Not Available | Negative | 2313938 - 2315065 | 41972.1 |
| inner membrane protein ybjo | SAMEA3710568_02380 | Not Available | Negative | 2315106 - 2315594 | 18519.1 |
| putrescine abc transporter membrane protein | SAMEA3710568_02381 | Not Available | Negative | 2315654 - 2316499 | 30502.3 |
| putrescine abc transporter membrane protein | SAMEA3710568_02382 | Not Available | Negative | 2316496 - 2317449 | 35518.7 |
| atp-binding component of putrescine transport system | SAMEA3710568_02383 | Not Available | Negative | 2317459 - 2318592 | 41949.3 |
| putrescine-binding periplasmic protein | SAMEA3710568_02384 | Not Available | Negative | 2318687 - 2319799 | 40869.8 |
| tetratricopeptide repeat protein | SAMEA3710568_02385 | Not Available | Negative | 2320151 - 2320627 | 17667.1 |
| ribosomal protein s6 modification protein | SAMEA3710568_02386 | Not Available | Negative | 2320715 - 2321617 | 32512.6 |
| nitroreductase a | SAMEA3710568_02387 | Not Available | Negative | 2321678 - 2322400 | 26825.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





