Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad dependent epimerase/dehydratase family protein | SAMEA3710568_02368 | Not Available | Positive | 2302821 - 2304251 | 53735.2 |
| nad dependent epimerase/dehydratase family | SAMEA3710568_02369 | Not Available | Positive | 2304350 - 2305363 | 38074.8 |
| n-acetylmuramoyl-l-alanine amidase amid | SAMEA3710568_02370 | Not Available | Negative | 2305360 - 2306190 | 31068.1 |
| protein ybjq | SAMEA3710568_02371 | Not Available | Negative | 2306187 - 2306510 | 11422.7 |
| uncharacterised protein | SAMEA3710568_02372 | Not Available | Negative | 2306721 - 2308523 | 69209.3 |
| putative lipoprotein ybjp | SAMEA3710568_02373 | Not Available | Positive | 2309139 - 2309654 | 18952.2 |
| arginine transporter atp-binding subunit | SAMEA3710568_02374 | Not Available | Positive | 2309872 - 2310600 | 27023.7 |
| arginine abc transporter periplasmic arginine-binding protein arti | SAMEA3710568_02375 | Not Available | Positive | 2310618 - 2311349 | 26971.0 |
| arginine transporter permease subunit artq | SAMEA3710568_02376 | Not Available | Positive | 2311356 - 2312072 | 26218.7 |
| arginine transporter permease subunit artm | SAMEA3710568_02377 | Not Available | Positive | 2312072 - 2312740 | 24915.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





