Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l13 | SAMEA3710568_02358 | Not Available | Positive | 2292031 - 2292459 | 16019.5 |
| 30s ribosomal protein s9 | SAMEA3710568_02359 | Not Available | Positive | 2292475 - 2292867 | 14857.1 |
| stringent starvation protein a | SAMEA3710568_02360 | Not Available | Positive | 2293262 - 2293900 | 24306.3 |
| clpxp protease specificity-enhancing factor | SAMEA3710568_02361 | Not Available | Positive | 2293906 - 2294403 | 18263.4 |
| putative c4-dicarboxylate transporter | SAMEA3710568_02362 | Not Available | Negative | 2294446 - 2295813 | 48804.9 |
| surface protein | SAMEA3710568_02363 | Not Available | Positive | 2296246 - 2297145 | 32314.1 |
| prismane hcp protein | SAMEA3710568_02364 | Not Available | Positive | 2297289 - 2298941 | 60150.4 |
| hcp oxidoreductase | SAMEA3710568_02365 | Not Available | Positive | 2298953 - 2299921 | 35755.8 |
| pyruvate dehydrogenase | SAMEA3710568_02366 | Not Available | Positive | 2300054 - 2301772 | 62036.0 |
| l-threonine aldolase | SAMEA3710568_02367 | Not Available | Positive | 2301809 - 2302810 | 36485.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





