Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein fis | SAMEA3710568_02328 | Not Available | Negative | 2259416 - 2259712 | 11240.6 |
| pp_02212 | SAMEA3710568_02329 | Not Available | Negative | 2259738 - 2260703 | Not Available |
| 50s ribosomal protein l11 methyltransferase | SAMEA3710568_02330 | Not Available | Negative | 2261032 - 2261913 | 31878.8 |
| sodium/panthothenate symporter | SAMEA3710568_02331 | Not Available | Negative | 2261925 - 2263376 | 51734.4 |
| predicted membrane protein | SAMEA3710568_02332 | Not Available | Negative | 2263366 - 2263608 | 9152.29 |
| acetyl-coa carboxylase biotin carboxylase subunit | SAMEA3710568_02333 | Not Available | Negative | 2263717 - 2265066 | 49353.7 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | SAMEA3710568_02334 | Not Available | Negative | 2265077 - 2265547 | 16688.2 |
| quinone oxidoreductase, yhdh family | SAMEA3710568_02335 | Not Available | Negative | 2266525 - 2267499 | 34709.8 |
| regulatory protein csrd | SAMEA3710568_02336 | Not Available | Positive | 2267651 - 2269591 | 73362.7 |
| rod shape-determining protein mreb | SAMEA3710568_02337 | Not Available | Positive | 2269896 - 2270939 | 36954.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





