Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hish | SAMEA3710568_02275 | Not Available | Negative | 2213743 - 2214333 | 21668.1 |
| imidazole glycerol-phosphate dehydratase/histidinol phosphatase | SAMEA3710568_02276 | Not Available | Negative | 2214333 - 2215400 | 40166.2 |
| histidinol-phosphate aminotransferase | SAMEA3710568_02277 | Not Available | Negative | 2215400 - 2216470 | 39363.3 |
| histidinol dehydrogenase | SAMEA3710568_02278 | Not Available | Negative | 2216467 - 2217771 | 46317.1 |
| atp phosphoribosyltransferase | SAMEA3710568_02279 | Not Available | Negative | 2217777 - 2218676 | 33414.9 |
| antitoxin yefm | SAMEA3710568_02281 | Not Available | Positive | 2219146 - 2219418 | 10199.3 |
| deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase | SAMEA3710568_02282 | Not Available | Negative | 2219635 - 2219754 | 4468.58 |
| anhydro-n-acetylmuramic acid kinase | SAMEA3710568_02283 | Not Available | Negative | 2219858 - 2220967 | 39576.8 |
| outer membrane lipoprotein slyb | SAMEA3710568_02284 | Not Available | Positive | 2221241 - 2221708 | 15602.7 |
| marr family transcriptional regulator | SAMEA3710568_02285 | Not Available | Negative | 2221755 - 2222189 | 16354.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





