Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-glucose-4,6-dehydratase | SAMEA3710568_02255 | Not Available | Positive | 2196562 - 2197647 | 40577.4 |
| dtdp-4-dehydrorhamnose reductase | SAMEA3710568_02256 | Not Available | Positive | 2197647 - 2198546 | 32566.7 |
| glucose-1-phosphate thymidylyltransferase | SAMEA3710568_02257 | Not Available | Positive | 2198605 - 2199483 | 32489.1 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMEA3710568_02258 | Not Available | Positive | 2199488 - 2200033 | 20823.8 |
| putative o-antigen transporter | SAMEA3710568_02259 | Not Available | Positive | 2200049 - 2201305 | 46401.1 |
| dtdp-rhamnosyl transferase rfbf | SAMEA3710568_02260 | Not Available | Positive | 2201335 - 2202225 | 33852.5 |
| dtdp-rhamnosyl transferase rfbg | SAMEA3710568_02261 | Not Available | Positive | 2202254 - 2203123 | 33804.4 |
| o-antigen polymerase | SAMEA3710568_02262 | Not Available | Positive | 2203143 - 2204291 | 43726.3 |
| protein rfbj | SAMEA3710568_02263 | Not Available | Positive | 2204732 - 2205121 | 14331.8 |
| glycosyltransferase | SAMEA3710568_02264 | Not Available | Positive | 2205179 - 2205670 | 18647.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





