Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enzyme | SAMEA3710568_02233 | Not Available | Positive | 2171044 - 2172954 | 70427.0 |
| glycoprotease family protein | SAMEA3710568_02234 | Not Available | Positive | 2173012 - 2173707 | 25198.3 |
| outer membrane protein slp | SAMEA3710568_02235 | Not Available | Positive | 2173747 - 2174328 | 20926.4 |
| ribonuclease d | SAMEA3710568_02237 | Not Available | Positive | 2176301 - 2177416 | 42228.0 |
| oxidoreductase, fad/nad-binding/iron-sulfur cluster binding protein | SAMEA3710568_02238 | Not Available | Negative | 2177470 - 2178435 | 35630.2 |
| putative phenylpropionate dioxygenase-like ring-hydroxylating dioxygenases, large terminal subunit | SAMEA3710568_02239 | Not Available | Negative | 2178491 - 2179153 | 25366.9 |
| putative repressor protein | SAMEA3710568_02240 | Not Available | Negative | 2179450 - 2180058 | 22860.4 |
| putative colanic acid biosynthesis acetyltransferase wcaf | SAMEA3710568_02241 | Not Available | Positive | 2180743 - 2181291 | 19963.2 |
| gdp-mannose 4,6-dehydratase | SAMEA3710568_02242 | Not Available | Positive | 2181317 - 2182438 | 42049.2 |
| putative nucleotide di-p-sugar epimerase or dehydratase | SAMEA3710568_02243 | Not Available | Positive | 2182441 - 2183409 | 36237.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





