Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts system mannose-specific transporter subunit iiab | SAMEA3710568_02223 | Not Available | Negative | 2161266 - 2162237 | 35049.6 |
| uncharacterised protein | SAMEA3710568_02224 | Not Available | Positive | 2162503 - 2162712 | 8073.75 |
| membrane protein, terc family/cbs/transporter associated domain-containing protein | SAMEA3710568_02225 | Not Available | Positive | 2162700 - 2164250 | 56336.2 |
| putative fog: eal domain protein | SAMEA3710568_02226 | Not Available | Negative | 2164254 - 2165852 | 59578.7 |
| l-serine ammonia-lyase 1 | SAMEA3710568_02227 | Not Available | Negative | 2165983 - 2167347 | 48908.6 |
| nudix hydrolase nudl | SAMEA3710568_02228 | Not Available | Negative | 2167531 - 2168109 | 21433.9 |
| aminodeoxychorismate synthase | SAMEA3710568_02229 | Not Available | Negative | 2168113 - 2169474 | 50993.3 |
| protein yoah | SAMEA3710568_02230 | Not Available | Positive | 2169548 - 2169727 | 6523.73 |
| domain of uncharacterised function (duf1889) | SAMEA3710568_02231 | Not Available | Negative | 2169847 - 2170146 | 10836.0 |
| putative translation initiation inhibitor, yjgf family | SAMEA3710568_02232 | Not Available | Negative | 2170568 - 2170915 | 12625.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





