Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transport protein | SAMEA3710568_02211 | Not Available | Negative | 2151859 - 2153232 | 48168.8 |
| transcriptional regulator kdgr | SAMEA3710568_02212 | Not Available | Positive | 2153409 - 2154200 | 30003.1 |
| uncharacterised protein | SAMEA3710568_02213 | Not Available | Negative | 2154343 - 2154582 | 8586.73 |
| uncharacterised protein | SAMEA3710568_02214 | Not Available | Positive | 2154959 - 2155246 | 10793.1 |
| 23s rrna methyltransferase a | SAMEA3710568_02216 | Not Available | Positive | 2156447 - 2157256 | 30400.6 |
| membrane protein yebn | SAMEA3710568_02217 | Not Available | Negative | 2157253 - 2157819 | 20114.3 |
| is1 orfb | SAMEA3710568_02219 | Not Available | Negative | 2158282 - 2158575 | 11542.2 |
| membrane protein yobd | SAMEA3710568_02220 | Not Available | Negative | 2159008 - 2159484 | 18168.1 |
| pts system mannose-specific transporter subunit iid | SAMEA3710568_02221 | Not Available | Negative | 2159539 - 2160390 | 30849.3 |
| pts system mannose-specific transporter subunit iic | SAMEA3710568_02222 | Not Available | Negative | 2160403 - 2161203 | 27637.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





