Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of uncharacterised function (duf1480) | SAMEA3710568_02201 | Not Available | Negative | 2141505 - 2141741 | 8753.26 |
| rrna (cytosine-c(5)-)-methyltransferase rsmf | SAMEA3710568_02202 | Not Available | Negative | 2142033 - 2143304 | 46954.9 |
| mce-like protein | SAMEA3710568_02203 | Not Available | Negative | 2143378 - 2144913 | 55188.3 |
| mce-like protein | SAMEA3710568_02204 | Not Available | Negative | 2144934 - 2145287 | 12386.9 |
| paraquat-inducible protein | SAMEA3710568_02205 | Not Available | Negative | 2145333 - 2145998 | 24626.8 |
| pqia family integral membrane protein | SAMEA3710568_02206 | Not Available | Negative | 2145967 - 2147250 | 48245.3 |
| gaf domain-containing protein | SAMEA3710568_02207 | Not Available | Positive | 2147380 - 2147877 | 18094.6 |
| putative solute/dna competence effector | SAMEA3710568_02208 | Not Available | Positive | 2147974 - 2148672 | 25863.9 |
| carboxy-terminal protease | SAMEA3710568_02209 | Not Available | Positive | 2148692 - 2150740 | 76672.2 |
| heat shock protein htpx | SAMEA3710568_02210 | Not Available | Positive | 2150932 - 2151813 | 31959.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





